A common challenge in the natural sciences is to disentangle distinct, unknown sources from observations. Examples of this source separation task include deblending galaxies in a crowded field, distinguishing the activity of individual neurons from overlapping signals, and separating seismic events from an ambient background. Traditional analyses often rely on simplified source models that fail to accurately reproduce the data. Recent advances have shown that diffusion models can directly learn complex prior distributions from noisy, incomplete data. In this work, we show that diffusion models can solve the source separation problem without explicit assumptions about the source. Our method relies only on multiple views, or the property that different sets of observations contain different linear transformations of the unknown sources. We show that our method succeeds even when no source is individually observed and the observations are noisy, incomplete, and vary in resolution. The learned diffusion models enable us to sample from the source priors, evaluate the probability of candidate sources, and draw from the joint posterior of the source distribution given an observation. We demonstrate the effectiveness of our method on a range of synthetic problems as well as real-world galaxy observations.

Diffusion policies have emerged as a mainstream paradigm for building visionlanguage-action (VLA) models. Although they demonstrate strong robot control capabilities, their training efficiency remains suboptimal. In this work, we identify a fundamental challenge in conditional diffusion policy training: when generative conditions are hard to distinguish, the training objective degenerates into modeling the marginal action distribution, a phenomenon we term loss collapse. To overcome this, we propose Cocos, a simple yet general solution that modifies the source distribution in the conditional flow matching to be condition-dependent. By anchoring the source distribution around semantics extracted from condition inputs, Cocos encourages stronger condition integration and prevents the loss collapse. We provide theoretical justification and extensive empirical results across simulation and real-world benchmarks. Our method achieves faster convergence and higher success rates than existing approaches, matching the performance of large-scale pre-trained VLAs using significantly fewer gradient steps and parameters. Cocos is lightweight, easy to implement, and compatible with diverse policy architectures, offering a general-purpose improvement to diffusion policy training.

Conditional generative modeling aims to learn a conditional data distribution from samples containing data-condition pairs. For this, diffusion and flow-based methods have attained compelling results. These methods use a learned (flow) model to transport an initial standard Gaussian noise that ignores the condition to the conditional data distribution. The model is hence required to learn both mass transport and conditional injection. To ease the demand on the model, we propose Condition-Aware Reparameterization for Flow Matching (CAR-Flow) - a lightweight, learned shift that conditions the source, the target, or both distributions. By relocating these distributions, CAR-Flow shortens the probability path the model must learn, leading to faster training in practice. On low-dimensional synthetic data, we visualize and quantify the effects of CAR-Flow. On higher-dimensional natural image data (ImageNet-256), equipping SiT-XL/2 with CAR-Flow reduces FID from 2.07 to 1.68, while introducing less than 0.6% additional parameters.

Diffusion policies have emerged as a mainstream paradigm for building vision-language-action (VLA) models. Although they demonstrate strong robot control capabilities, their training efficiency remains suboptimal. In this work, we identify a fundamental challenge in conditional diffusion policy training: when generative conditions are hard to distinguish, the training objective degenerates into modeling the marginal action distribution, a phenomenon we term loss collapse. To overcome this, we propose Cocos, a simple yet general solution that modifies the source distribution in the conditional flow matching to be condition-dependent. By anchoring the source distribution around semantics extracted from condition inputs, Cocos encourages stronger condition integration and prevents the loss collapse. We provide theoretical justification and extensive empirical results across simulation and real-world benchmarks. Our method achieves faster convergence and higher success rates than existing approaches, matching the performance of large-scale pre-trained VLAs using significantly fewer gradient steps and parameters. Cocos is lightweight, easy to implement, and compatible with diverse policy architectures, offering a general-purpose improvement to diffusion policy training.

This study presents a conditional flow matching framework for solving physics-constrained Bayesian inverse problems. In this setting, samples from the joint distribution of inferred variables and measurements are assumed available, while explicit evaluation of the prior and likelihood densities is not required. We derive a simple and self-contained formulation of both the unconditional and conditional flow matching algorithms, tailored specifically to inverse problems. In the conditional setting, a neural network is trained to learn the velocity field of a probability flow ordinary differential equation that transports samples from a chosen source distribution directly to the posterior distribution conditioned on observed measurements. This black-box formulation accommodates nonlinear, high-dimensional, and potentially non-differentiable forward models without restrictive assumptions on the noise model. We further analyze the behavior of the learned velocity field in the regime of finite training data. Under mild architectural assumptions, we show that overtraining can induce degenerate behavior in the generated conditional distributions, including variance collapse and a phenomenon termed selective memorization, wherein generated samples concentrate around training data points associated with similar observations. A simplified theoretical analysis explains this behavior, and numerical experiments confirm it in practice. We demonstrate that standard early-stopping criteria based on monitoring test loss effectively mitigate such degeneracy. The proposed method is evaluated on several physics-based inverse problems. We investigate the impact of different choices of source distributions, including Gaussian and data-informed priors. Across these examples, conditional flow matching accurately captures complex, multimodal posterior distributions while maintaining computational efficiency.

Independent component analysis is a core framework within blind source separation for recovering latent source signals from observed mixtures under statistical independence assumptions. In this work, we propose PDGMM-VAE, a source-oriented variational autoencoder in which each latent dimension, interpreted explicitly as an individual source signal, is assigned its own Gaussian mixture model prior. Unlike conventional VAE formulations with a shared simple prior, the proposed framework imposes per-dimension heterogeneous prior constraints, enabling the model to capture diverse non-Gaussian source statistics and thereby promote source separation under a probabilistic encoder-decoder architecture. Importantly, the parameters of these per-dimension GMM priors are not fixed in advance, but are adaptively learned and automatically refined toward convergence together with the encoder and decoder parameters under the overall training objective. Within this formulation, the encoder serves as a demixing mapping from observations to latent sources, while the decoder reconstructs the observed mixtures from the inferred components. The proposed model provides a systematic study of an idea that had previously only been noted in our preliminary form, namely, equipping different latent sources with different GMM priors for ICA, and formulates it as a full VAE framework with end-to-end training and per-dimension prior learning. Experimental results on both linear and nonlinear mixing problems demonstrate that PDGMM-VAE can recover latent source signals and achieve satisfactory separation performance.

Scientific modeling applications often require estimating a distribution of parameters consistent with a dataset of observations - an inference task also known as source distribution estimation. This problem can be ill-posed, however, since many different source distributions might produce the same distribution of data-consistent simulations. To make a principled choice among many equally valid sources, we propose an approach which targets the maximum entropy distribution, i.e., prioritizes retaining as much uncertainty as possible. Our method is purely sample-based - leveraging the Sliced-Wasserstein distance to measure the discrepancy between the dataset and simulations - and thus suitable for simulators with intractable likelihoods. We benchmark our method on several tasks, and show that it can recover source distributions with substantially higher entropy than recent source estimation methods, without sacrificing the fidelity of the simulations. Finally, to demonstrate the utility of our approach, we infer source distributions for parameters of the Hodgkin-Huxley model from experimental datasets with hundreds of single-neuron measurements. In summary, we propose a principled method for inferring source distributions of scientific simulator parameters while retaining as much uncertainty as possible.

Our results are corroborated with experiments.

Single-cell genomics has significantly advanced our understanding of cellular behavior, catalyzing innovations in treatments and precision medicine.

Scientific modeling applications often require estimating a distribution of parameters consistent with a dataset of observations--an inference task also known as source distribution estimation. This problem can be ill-posed, however, since many different source distributions might produce the same distribution of data-consistent simulations. To make a principled choice among many equally valid sources, we propose an approach which targets the maximum entropy distribution, i.e., prioritizes retaining as much uncertainty as possible.